LTERN Data Portal
Desert Ecology Plot Network: Mammal Abundance Plot-data, Simpson Desert, Western Queensland, 1990–2011
- Citation
-
Wardle, G; Dickman, C (): Desert Ecology Plot Network: Mammal Abundance Plot-data, Simpson Desert, Western Queensland, 1990–2011. Long Term Ecological Research Network. http://www.ltern.org.au/knb/metacat/ltern.37.25/html
- Identifier
-
- docid
- ltern.37.25
- Data Creators
-
- Individual
- Professor Glenda Wardle
- Position
- Plot Leader
- Organization
- The University of Sydney
- Individual
- Professor Chris Dickman
- Position
- Plot Leader
- Organization
- The University of Sydney
- Abstract
-
This mammal abundance trap data package comprises capture data for a specified duration of trapping nights in the Simpson Desert, Western Queensland. Captured mammal fauna were identified and recaptures during the same session were removed (i.e. individuals were only counted once). Date, site and grid number were recorded for all captures, and captured animals were also marked by a unique ear notch prior to their release to identify recaptures. The network program uses a core of 12 sites. The trapping survey aims to quantitatively track long-term shifts in biodiversity and ecological processes in relation to key drivers, including unpredictable rainfall and droughts, fire, feral predators and grazing. A synopsis of related data packages which have been collected as part of the Desert Ecology's full program is provided at http://www.ltern.org.au/index.php/ltern-plot-networks/desert-ecology.
- Contacts for Questions on the Use and Interpretation of Data
-
- Individual
- Professor Glenda Wardle
- Position
- Plot Leader
- Organization
- The University of Sydney
- Address
-
Heydon-Laurence Building A08
The University of Sydney
Sydney. NSW 2006
Australia
- Phone
-
- voice
- 02 9351 7113 or 0425 382 205
- Email Address
- glenda.wardle@sydney.edu.au
- Individual
- Professor Chris Dickman
- Position
- Plot Leader
- Organization
- The University of Sydney
- Address
-
Heydon-Laurence Building A08
The University of Sydney
Sydney. NSW 2006
Australia
- Phone
-
- voice
- 02 9351 2318
- Email Address
- chris.dickman@sydney.edu.au
- Individual
- Dr Aaron Greenville
- Position
- Research Assistant
- Organization
- The University of Sydney
- Address
-
Heydon-Laurence Building A08
The University of Sydney
Sydney. NSW 2006
Australia
- Phone
-
- voice
- 02 9351 8577
- Email Address
- aaron.greenville@sydney.edu.au
- Individual
- Mr Bobby Tamayo
- Position
- Operational Manager
- Organization
- The University of Sydney
- Address
-
Heydon-Laurence Building A08
The University of Sydney
Sydney. NSW 2006
Australia
- Phone
-
- voice
- 02 9351 8577
- Email Address
- bobby.tamayo@sydney.edu.au
- Project Information and Data Owners
-
- Title
- Desert Ecology Plot Network Research Group
- Personnel
-
- Role
- Data Owner
- Individual
- Professor Glenda Wardle
- Position
- Plot Leader
- Organization
- The University of Sydney
- Role
- Data Owner
- Individual
- Professor Chris Dickman
- Position
- Plot Leader
- Organization
- The University of Sydney
- Role
- Plot Network Contact
- Individual
- Dr Aaron Greenville
- Position
- Research Assistant
- Organization
- The University of Sydney
- Role
- Plot Network Contact
- Individual
- Mr Bobby Tamayo
- Position
- Operational Manager
- Organization
- The University of Sydney
- Methods and Sampling Information
-
- Methods
-
Method Step 1
- Description
-
Plot setup
The network program uses 12 sites which are spaced at least 15 km apart, each comprising at least two 1-ha trapping grids, or plots which are spaced between 0.5-2 km apart. Additional grids have been used at some of the sites. Trapping grids are set out with thirty-six traps arrayed in a grid covering 1 ha; each grid comprises 6 lines of 6 traps spaced 20 m apart. The top line of traps extends along the dune crest, where consecutive numbering starts, and finishes along the sixth line 100 m distant in the dune valley or ‘swale’. Traps on each grid are opened for 1–6 nights (usually 3), approximately four times per year and checked in the mornings and sometimes afternoons, and animals are removed for processing.
Method Step 2- Description
-
Pitfall trap setup
Mammal fauna are captured in pitfall traps. Each pitfall is made from PVC stormwater pipe, 160 mm in diameter and 600 mm deep, sunk vertically into the ground so that its top is flush with ground level. To increase trap success, by intercepting and guiding surface-active animals into the trap, a drift fence of aluminium wire mesh (flyscreen) extends outwards from the top of each trap, secured in place by means of a shallow trench. The fence is 30 cm high and runs for 2.5 m on each side of the pitfall opening. The bottom end of the pit is covered with flyscreen to form a floor to prevent captured animals from digging their way out, and all pits are capped with metal lids when not in use. A tiny amount of insecticide (Coopex) is sprinkled around each trap to prevent ant attack.
• Pitfalls must be dug into the ground, so that the lip of the pipe is level to the ground, this can be done using a shovel. Wire mesh drift fence is bent at about 10 cm to form an L-shape and dug into the ground and pulled straight and upright.
• Open all 36 pits using a spoon or pocket screwdriver
• Make sure the mesh is directly over the open pit and there is no a lip as reptiles can use it as a bridge over the pit and don’t get caught.
• Empty out excess sand from all pits .
• Sprinkle Coopex around the edge of each pit to deter ants.
• Check pitfall traps in the cool of the early morning to reduce stress on the animal.
• Thoroughly check each pitfall, first by visually ensuring that there is not a snake or other venomous animal inside the pit. Once certain that it is safe, cover hand with calico trapping bag and stick arm down pit and feel around for any mammals or reptiles, carefully sift through the sand as Leristas and other small lizards are hard to see. Leather gloves can be worn for extra protection against bites and scratches.
• Remove any invertebrates from the pit, such as scorpions and centipedes and release at point of capture.
• Be careful when removing animals from pitfalls, do not grab any animal by the tail. Place bag over animal and invert it inside pit to safely secure animal.
• Place each animal in a separate calico bag and tie the top tightly to avoid escapes. Write trap and grid number on bag with permanent marker to ensure animal can be relased at point of capture after processing. Store the animals in large calico bag.
• Once all traps are checked, animals are processed on site and released at point of capture.
• At the end of the trapping survey (on the third day), place metal lids firmly on pitfall trap and ensure lid sits tight. Cover lid with a bit of sand to reduce exposure to sunlight and curious animals
- Instrument
-
- Pitfall traps capped with metal.
- PVC stormwater pipe, 160 mm in diameter and 600 mm deep.
- Drift fence of aluminium wire mesh (flyscreen) 30 cm x 2.5 m.
Method Step 3- Description
-
Data collection and capture marking
Date, site and grid number were recorded for all captures, and captured animals were also marked with unique ID numbers allowing identification of recaptured animals (related data packages contain data relating to morphometric observations, along with unique ID numbers). Ear samples are retained in ethanol as DNA samples. Any scats that are produced by animals during handling, or while they are in handling-bags, are kept in separately labelled vials for later analysis of their diet.
Method Step 4- Description
-
Release
Date, site and grid number were recorded for all captures, and captured animals were also marked with unique ID numbers by ear notching prior to their release, allowing identification of recaptured animals.
- Sampling
-
- Study Extent Description
-
The network program uses a core of 12 sites. Note Dasycercus cristicauda is in doubt and maybe D. blythi
- Sampling Description
-
The network program uses a core of 12 sites which are spaced at least 15 km apart, each comprising two 1-ha trapping grids, or plots which are spaced between 0.5-2 km apart. Thirty-six traps were arrayed in a grid covering 1 ha; each grid comprised 6 lines of 6 traps spaced 20 m apart. The top line of traps extended along the dune crest where consecutive numbering starts, and finished along the sixth line 100 m distant in the dune valley or ‘swale’. Traps on each grid were opened for 3 nights once per year and checked in the mornings and sometimes afternoons. Other elements of the plot network’s full program share the sampling structure and core sites/plot/grid configuration of the study design.
- Keywords and Subject Categories
-
- Keywords List
-
- Mammals
- GCMD
-
- Earth Science > Biological Classification > Animals/Vertebrates > Mammals
- ANZSRC-FOR
-
- 0602
- 0608
- 0501
- LTERN Monitoring Themes
-
- Mammals
- Geographic Coverage
-
- Geographic Description
- Simpson Desert, Western Queensland.
- Bounding Coordinates
-
- West
- 137.86511 degrees
- East
- 138.6059 degrees
- North
- -23.20549 degrees
- South
- -23.99417 degrees
- Temporal Coverage
-
- Date Begin
- 1990
- Date End
- 2011
- Taxonomic Coverage and Classification
-
- Classification
-
-
- Species
- Dasycercus cristicauda
-
- Species
- Leggadina forresti
-
- Species
- Mus musculus
-
- Species
- Ningaui ridei
-
- Species
- Notomys alexis
-
- Species
- Planigale gilesi
-
- Species
- Planigale tenuirostris
-
- Species
- Pseudomys desertor
-
- Species
- Pseudomys hermannsburgensis
-
- Species
- Rattus villosissimus
-
- Species
- Sminthopsis crassicaudata
-
- Species
- Sminthopsis hirtipes
-
- Species
- Sminthopsis macroura
-
- Species
- Sminthopsis youngsoni
-
- Species
- Tachyglossus aculeatus
-
- Intellectual Rights, Licence and Usage Conditions
-
CC-BY-4_0 Special Conditions: Data users must request permission from the Data Provider (Glenda Wardle or Chris Dickman) before access to latitudinal and longitudinal data is granted. Data relating to the exact location of grids (i.e. latitudinal and longitudinal data) is restricted to mediated access in order to mitigate the risk of interference or theft of threatened or rare species. All other Project or Background Data will be open.
- Data Table
-
- Name
- derg_small_mammal_trapping_data_background_p74t220.csv
- Attribute Information
-
year
- Name
- year
- Definition
- Year of survey
- Measurement Type
- dateTime
- Measurement Domain
-
- Format
- YYYY
monthyear- Name
- monthyear
- Definition
- Month and year of survey identifier
- Measurement Type
- dateTime
- Measurement Domain
-
- Format
- Mmm.YY
sitename- Name
- sitename
- Definition
- Name of site
- Measurement Type
- nominal
- Measurement Domain
-
- Text Domain
-
- Definition
- Character
site_code- Name
- site_code
- Definition
- Site level code
- Measurement Type
- nominal
- Measurement Domain
-
- Text Domain
-
- Definition
- Character
sitegrid- Name
- sitegrid
- Definition
- Site and trapping grid code
- Measurement Type
- nominal
- Measurement Domain
-
- Text Domain
-
- Definition
- Character
tripno- Name
- tripno
- Definition
- Arbitrary trip identifier
- Measurement Type
- nominal
- Measurement Domain
-
- Text Domain
-
- Definition
- Character
nights- Name
- nights
- Definition
- Number of nights plot is open
- Measurement Type
- ratio
- Measurement Domain
-
- Standard Unit
- number
- Number Type
- whole
no_traps- Name
- no_traps
- Definition
- Number of traps opened per plot (<= 36)
- Measurement Type
- ratio
- Measurement Domain
-
- Standard Unit
- number
- Number Type
- whole
total_trap_nights- Name
- total_trap_nights
- Definition
- Number of nights grids were opened x number of traps
- Measurement Type
- ratio
- Measurement Domain
-
- Standard Unit
- number
- Number Type
- whole
fauna_descriptor- Name
- fauna_descriptor
- Definition
- Species caught (species name - binomial). If no captures were recorded on a grid then the words “No Captures” are entered in “species” and SiteGrid is recorded
- Measurement Type
- nominal
- Measurement Domain
-
- Text Domain
-
- Definition
- Character
recapt_same_trip- Name
- recapt_same_trip
- Definition
- Should be blank. Blank means new animal i.e. Not a recapature on the same sampling period
- Measurement Type
- nominal
- Measurement Domain
-
- Text Domain
-
- Definition
- Character
captures- Name
- captures
- Definition
- Total captures over 3 nights of trapping. If there were nil captures on a grid, the record grid is recorded (in the trap column), and 'No captures' is recorded in the fauna_descriptor column.
- Measurement Type
- ratio
- Measurement Domain
-
- Standard Unit
- number
- Number Type
- whole
captures_100tn- Name
- captures_100tn
- Definition
- Captures standardised for unequal trapping effort. captures/100 trap nights = captures/(number pitfalls (usually 36)*nights opened (usually 3))*100
- Measurement Type
- ratio
- Measurement Domain
-
- Standard Unit
- number
- Number Type
- real
family- Name
- family
- Definition
- Mammal family
- Measurement Type
- nominal
- Measurement Domain
-
- Text Domain
-
- Definition
- Character
- Number Of Records
- 3533
- Physical Structure Description
-
- Object Name
- derg_small_mammal_trapping_data_background_p74t220.csv
- Size
- 364510 byte
- Text Format
-
- Number of Header Lines
- 1
- Record Delimiter
- #x0A
- Attribute Orientation
- column
- Simple Delimited
-
- Field Delimiter
- ,
- Distribution
-
Online
- URL
- ltern.40.3
- Access
-
- Access Control
-
- Auth System
- knb
- Order
- allowFirst
- Allow:
-
Permission Principal [read] cn=allusers,o=unaffiliated,dc=ecoinformatics,dc=org [all] cn=submitters,o=unaffiliated,dc=ecoinformatics,dc=org [read] uid=govhack,o=unaffiliated,dc=ecoinformatics,dc=org
- Additional Metadata Links
-
additionalLinksAdditional Metadata : additionalLinks
- Metadata
-
- additionalLinks
-
- url
-
- @name
- Desert Ecology Plot Network homepage
- Access
-
- Access Control
-
- Auth System
- knb
- Order
- allowFirst
- Allow:
-
Permission Principal [read] public [read] uid=wardle,o=unaffiliated,dc=ecoinformatics,dc=org [read] uid=dickman,o=unaffiliated,dc=ecoinformatics,dc=org [read] uid=delacey,o=unaffiliated,dc=ecoinformatics,dc=org [read] uid=greenville,o=unaffiliated,dc=ecoinformatics,dc=org [read] uid=tamayo,o=unaffiliated,dc=ecoinformatics,dc=org [all] cn=submitters,o=unaffiliated,dc=ecoinformatics,dc=org
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